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GOntoSim


    • In this study, we propose GOntoSim, a novel method to determine the functional similarity between genes.
    • GOntoSim quantifies the similarity between pairs of GO terms, by taking the graph structure and the information content (IC) of nodes into consideration.
    • We achieved a purity score of 0.94 in contrast to 0.48 for the state-ofthe-art measures on the enzyme dataset.
    • Click here to access the web server

    • GOntoSim can be downloaded from Github

    • Reference: Kamran, A.B., Naveed, H. GOntoSim: a semantic similarity measure based on LCA and common descendants. Sci Rep 12, 3818 (2022). https://doi.org/10.1038/s41598-022-07624-3










Computational Biology Research Lab

Precision Medicine Lab, National Center in Big Data and Cloud Computing

Phone: +92 51 111 128 128 Ext. 672

Email: hammad.naveed@nu.edu.pk